Discovery

Boston Children’s researchers uncover nuclear FAH role in CDK4/6-resistant breast cancer

Boston Children’s researchers uncover nuclear FAH role in CDK4/6-resistant breast cancer

Researchers co-led by Naama Kanarek of Boston Children's Hospital and Taru Muranen identified a previously unrecognized nuclear function of fumarylacetoacetate hydrolase (FAH) that drives resistance to CDK4/6 inhibitors in hormone receptor-positive (HR+) breast cancer, according to a study published September 30, 2026 in Science Advances.

CDK4/6 inhibitors are standard treatments for HR+ breast cancer, but resistance commonly develops and is not always explained by known genomic alterations. Using breast cancer models and patient tumor samples, the researchers found that CDK4/6 inhibition caused FAH, an enzyme best known for its role in tyrosine metabolism in the cytosol, to relocate to the nucleus.

In the nucleus, FAH interacted with cyclin-dependent kinase 9 (CDK9) and increased its activity, allowing cancer cells to survive despite CDK4/6 blockade. Inhibiting CDK9 reversed FAH-mediated resistance in experimental models, identifying CDK9 as a potential therapeutic vulnerability.

The researchers also reported enrichment of nuclear FAH in tumors from patients who had relapsed after CDK4/6 inhibitor treatment, suggesting that nuclear FAH could potentially serve as a biomarker of resistance.

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The mechanism is distinct from established routes of CDK4/6 inhibitor resistance including RB1 loss, cyclin E/CDK2 activation, and signaling through pathways such as PI3K/AKT/mTOR and MAPK, because it does not depend on a new genomic alteration.

The findings remain preclinical. Nuclear FAH has not been validated as a predictive biomarker, and CDK9 inhibition has not yet been clinically tested specifically as a strategy to overcome FAH-mediated resistance in HR+ breast cancer.


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